omics

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Versions in this module

v1

v1.5.0

Aug 24, 2026

Changes in this version

type AnnotationStoreVersion

+ ID string

type AnnotationStoreVersionSummary

+ ID string

+ StoreName string

+ type CreateAnnotationStoreResponse struct

+ CreationTime time.Time

+ ID string

+ Name string

+ Status string

+ VersionName string

type VariantStore

+ SseConfig map[string]any

type VariantStoreSummary

+ SseConfig map[string]any

v1.4.0

Aug 19, 2026

v1.3.5

Aug 19, 2026

v1.3.4

Aug 18, 2026

v1.3.3

Aug 17, 2026

v1.3.2

Aug 16, 2026

v1.3.1

Aug 16, 2026

Changes in this version

+ type AnnotationImportItemDetail struct

+ JobStatus string

+ Source string

type AnnotationImportJob

+ AnnotationFields map[string]string

+ FormatOptions map[string]any

+ RunLeftNormalization bool

+ StatusMessage string

+ UpdateTime time.Time

+ VersionName string

+ type AnnotationImportJobSummary struct

+ AnnotationFields map[string]string

+ CompletionTime *time.Time

+ CreationTime time.Time

+ DestinationName string

+ ID string

+ RoleARN string

+ RunLeftNormalization bool

+ Status string

+ UpdateTime time.Time

+ VersionName string

type AnnotationStore

+ NumVersions int32

+ StatusMessage string

+ StoreArn string

+ StoreSizeBytes int64

+ type AnnotationStoreSummary struct

+ CreationTime time.Time

+ Description string

+ ID string

+ Name string

+ Reference map[string]any

+ SseConfig map[string]any

+ Status string

+ StatusMessage string

+ StoreArn string

+ StoreFormat string

+ StoreSizeBytes int64

+ UpdateTime time.Time

type AnnotationStoreVersion

+ StatusMessage string

+ VersionArn string

+ VersionSizeBytes int64

+ type AnnotationStoreVersionSummary struct

+ CreationTime time.Time

+ Description string

+ Status string

+ StatusMessage string

+ StoreID string

+ UpdateTime time.Time

+ VersionArn string

+ VersionName string

+ VersionSizeBytes int64

type Configuration

+ ARN string

+ RunConfigurations *ConfigurationRunConfigurations

+ Status string

+ Tags map[string]string

+ UUID string

+ type ConfigurationRunConfigurations struct

+ VpcConfig *ConfigurationVpcConfig

+ type ConfigurationVpcConfig struct

+ SecurityGroupIDs []string

+ SubnetIDs []string

+ VpcID string

+ type DefaultRunSetting struct

+ Name string

+ OutputURI string

+ Priority int32

+ RoleARN string

+ RunGroupID string

+ RunTags map[string]string

+ WorkflowID string

type InMemoryBackend

+ func (b *InMemoryBackend) GetRunBatchSummary(id string) (RunBatchSummary, error)

+ type InlineRunSetting struct

+ Name string

+ OutputURI string

+ Priority *int32

+ RunSettingID string

+ RunTags map[string]string

type ReferenceMetadata

+ Files map[string]any

type Run

+ RunSettingID string

type RunBatch

+ DeletedRunCount int32

+ OutputURI string

+ ProcessedTime time.Time

+ RunGroupID string

+ SubmissionFailureCount int32

+ SubmissionSuccessCount int32

+ SubmittedTime time.Time

+ TotalRuns int32

+ UUID string

+ type RunBatchSummary struct

+ CancelledRunCount int32

+ CompletedRunCount int32

+ FailedRunCount int32

+ PendingRunCount int32

+ RunningRunCount int32

+ type ShareFilter struct

+ ResourceArns []string

+ Status []string

+ Type []string

type StorageBackend

+ GetRunBatchSummary func(id string) (RunBatchSummary, error)

+ type StoreStatusFilter struct

+ Status string

+ type VariantImportItemDetail struct

+ JobStatus string

+ Source string

+ StatusMessage string

type VariantImportJob

+ AnnotationFields map[string]string

+ RunLeftNormalization bool

+ StatusMessage string

+ UpdateTime time.Time

+ type VariantImportJobSummary struct

+ AnnotationFields map[string]string

+ CompletionTime *time.Time

+ CreationTime time.Time

+ DestinationName string

+ ID string

+ RoleARN string

+ RunLeftNormalization bool

+ Status string

+ UpdateTime time.Time

type VariantStore

+ StatusMessage string

+ StoreArn string

+ StoreSizeBytes int64

+ type VariantStoreSummary struct

+ CreationTime time.Time

+ Description string

+ ID string

+ Name string

+ Reference map[string]any

+ Status string

+ StatusMessage string

+ StoreArn string

+ StoreSizeBytes int64

+ UpdateTime time.Time

v1.3.0

Aug 3, 2026

v1.2.0

Aug 3, 2026

Changes in this version

+ var ErrInvalidState = awserr.New(errConflict, awserr.ErrConflict)

+ type ConfigurationDetails struct

+ Arn string

+ Name string

+ UUID string

+ type ImportJobFilter struct

+ Status string

+ StoreName string

type MultipartReadSetUpload

+ Description string

+ GeneratedFrom string

+ ReferenceARN string

+ SampleID string

+ SourceFileType string

+ SubjectID string

type ReadSetMetadata

+ FileType string

+ type ReferenceImportJobFilter struct

+ Status string

type Run

+ Configuration *ConfigurationDetails

+ NetworkingMode string

+ RunGroupID string

+ RunOutputURI string

+ UUID string

+ type RunBatchFilter struct

+ Name string

+ RunGroupID string

+ Status string

+ type RunFilter struct

+ BatchID string

+ Name string

+ RunGroupID string

+ Status string

+ type RunGroupFilter struct

+ Name string

+ type RunTaskFilter struct

+ Status string

+ type RunsInBatchFilter struct

+ RunID string

+ RunSettingID string

+ SubmissionStatus string

type S3AccessPolicy

+ StoreID string

+ StoreType string

+ UpdateTime *time.Time

type Workflow

+ UUID string

+ type WorkflowFilter struct

+ Name string

+ Type string

+ type WorkflowVersionFilter struct

+ Type string

v1.1.4

Jul 20, 2026

v1.1.3

Jul 20, 2026

v1.1.2

Jul 20, 2026

v1.1.1

Jul 20, 2026

v1.1.0

Jul 19, 2026

Changes in this version

+ var ErrAlreadyExists = awserr.New(errConflict, awserr.ErrAlreadyExists)

+ var ErrNilAppContext = errors.New("omics: nil app context")

+ var ErrNotFound = awserr.New(errResourceNotFound, awserr.ErrNotFound)

+ var ErrValidation = awserr.New(errValidation, awserr.ErrInvalidParameter)

+ func WithRegion(ctx context.Context, region string) context.Context

+ type AnnotationImportItem struct

+ Source string

+ type AnnotationImportJob struct

+ CompletionTime *time.Time

+ CreationTime time.Time

+ DestinationName string

+ ID string

+ Items []AnnotationImportItem

+ RoleARN string

+ Status string

+ type AnnotationStore struct

+ Arn string

+ CreationTime time.Time

+ Description string

+ ID string

+ Name string

+ Reference map[string]any

+ SseConfig map[string]any

+ Status string

+ StoreFormat string

+ StoreOptions map[string]any

+ Tags map[string]string

+ UpdateTime time.Time

+ type AnnotationStoreVersion struct

+ Arn string

+ CreationTime time.Time

+ Description string

+ Status string

+ StoreID string

+ StoreName string

+ Tags map[string]string

+ UpdateTime time.Time

+ VersionName string

+ type Configuration struct

+ CreationTime time.Time

+ Description string

+ Name string

+ Value string

+ type Handler struct

+ Backend StorageBackend

+ func NewHandler(b StorageBackend) *Handler

+ func (h *Handler) ExtractOperation(c *echo.Context) string

+ func (h *Handler) ExtractResource(c *echo.Context) string

+ func (h *Handler) GetSupportedOperations() []string

+ func (h *Handler) Handler() echo.HandlerFunc

+ func (h *Handler) MatchPriority() int

+ func (h *Handler) Name() string

+ func (h *Handler) Reset()

+ func (h *Handler) Restore(ctx context.Context, data []byte) error

+ func (h *Handler) RouteMatcher() service.Matcher

+ func (h *Handler) Snapshot(ctx context.Context) []byte

+ type InMemoryBackend struct

+ func NewInMemoryBackend(accountID, region string) *InMemoryBackend

+ func (b *InMemoryBackend) AbortMultipartReadSetUpload(sequenceStoreID, uploadID string) error

+ func (b *InMemoryBackend) AcceptShare(shareID string) (*Share, error)

+ func (b *InMemoryBackend) AccountID() string

+ func (b *InMemoryBackend) BatchDeleteReadSet(sequenceStoreID string, ids []string) ([]ReadSetBatchError, error)

+ func (b *InMemoryBackend) CancelAnnotationImportJob(jobID string) error

+ func (b *InMemoryBackend) CancelRun(id string) error

+ func (b *InMemoryBackend) CancelRunBatch(id string) error

+ func (b *InMemoryBackend) CancelVariantImportJob(jobID string) error

+ func (b *InMemoryBackend) CompleteMultipartReadSetUpload(sequenceStoreID, uploadID string) (*ReadSetMetadata, error)

+ func (b *InMemoryBackend) CreateAnnotationStore(name, storeFormat string, reference, sseConfig, storeOptions map[string]any, ...) (*AnnotationStore, error)

+ func (b *InMemoryBackend) CreateAnnotationStoreVersion(name, versionName, description string, tags map[string]string) (*AnnotationStoreVersion, error)

+ func (b *InMemoryBackend) CreateConfiguration(name, description string) (*Configuration, error)

+ func (b *InMemoryBackend) CreateMultipartReadSetUpload(sequenceStoreID, name, sequenceType string, tags map[string]string) (*MultipartReadSetUpload, error)

+ func (b *InMemoryBackend) CreateReferenceStore(name, description string, tags map[string]string) (*ReferenceStore, error)

+ func (b *InMemoryBackend) CreateRunCache(name, cacheS3Location string, tags map[string]string) (*RunCache, error)

+ func (b *InMemoryBackend) CreateRunGroup(name string, maxCPUs, maxRuns, maxDuration int, maxGPUs int, ...) (*RunGroup, error)

+ func (b *InMemoryBackend) CreateSequenceStore(name, description string, tags map[string]string) (*SequenceStore, error)

+ func (b *InMemoryBackend) CreateShare(resourceARN, principalSubscriber, name string) (*Share, error)

+ func (b *InMemoryBackend) CreateVariantStore(name string, reference map[string]any, tags map[string]string) (*VariantStore, error)

+ func (b *InMemoryBackend) CreateWorkflow(name, description, _, _, engine string, tags map[string]string) (*Workflow, error)

+ func (b *InMemoryBackend) CreateWorkflowVersion(workflowID, versionName, description string, tags map[string]string) (*WorkflowVersion, error)

+ func (b *InMemoryBackend) DeleteAnnotationStore(name string) (*AnnotationStore, error)

+ func (b *InMemoryBackend) DeleteAnnotationStoreVersions(name string, versionNames []string) ([]VersionDeleteError, error)

+ func (b *InMemoryBackend) DeleteConfiguration(name string) error

+ func (b *InMemoryBackend) DeleteReference(referenceStoreID, id string) error

+ func (b *InMemoryBackend) DeleteReferenceStore(id string) error

+ func (b *InMemoryBackend) DeleteRun(id string) error

+ func (b *InMemoryBackend) DeleteRunBatch(id string) error

+ func (b *InMemoryBackend) DeleteRunCache(id string) error

+ func (b *InMemoryBackend) DeleteRunGroup(id string) error

+ func (b *InMemoryBackend) DeleteRunsInBatch(batchID string) error

+ func (b *InMemoryBackend) DeleteS3AccessPolicy(s3AccessPointARN string) error

+ func (b *InMemoryBackend) DeleteSequenceStore(id string) error

+ func (b *InMemoryBackend) DeleteShare(shareID string) (*Share, error)

+ func (b *InMemoryBackend) DeleteVariantStore(name string) (*VariantStore, error)

+ func (b *InMemoryBackend) DeleteWorkflow(id string) error

+ func (b *InMemoryBackend) DeleteWorkflowVersion(workflowID, versionName string) error

+ func (b *InMemoryBackend) GetAnnotationImportJob(jobID string) (*AnnotationImportJob, error)

+ func (b *InMemoryBackend) GetAnnotationStore(name string) (*AnnotationStore, error)

+ func (b *InMemoryBackend) GetAnnotationStoreVersion(name, versionName string) (*AnnotationStoreVersion, error)

+ func (b *InMemoryBackend) GetConfiguration(name string) (*Configuration, error)

+ func (b *InMemoryBackend) GetReadSetActivationJob(sequenceStoreID, jobID string) (*ReadSetActivationJob, error)

+ func (b *InMemoryBackend) GetReadSetBytes(sequenceStoreID, id string) ([]byte, error)

+ func (b *InMemoryBackend) GetReadSetExportJob(sequenceStoreID, jobID string) (*ReadSetExportJob, error)

+ func (b *InMemoryBackend) GetReadSetImportJob(sequenceStoreID, jobID string) (*ReadSetImportJob, error)

+ func (b *InMemoryBackend) GetReadSetMetadata(sequenceStoreID, id string) (*ReadSetMetadata, error)

+ func (b *InMemoryBackend) GetReferenceBytes(referenceStoreID, id string) ([]byte, error)

+ func (b *InMemoryBackend) GetReferenceImportJob(referenceStoreID, jobID string) (*ReferenceImportJob, error)

+ func (b *InMemoryBackend) GetReferenceMetadata(referenceStoreID, id string) (*ReferenceMetadata, error)

+ func (b *InMemoryBackend) GetReferenceStore(id string) (*ReferenceStore, error)

+ func (b *InMemoryBackend) GetRun(id string) (*Run, error)

+ func (b *InMemoryBackend) GetRunBatch(id string) (*RunBatch, error)

+ func (b *InMemoryBackend) GetRunCache(id string) (*RunCache, error)

+ func (b *InMemoryBackend) GetRunGroup(id string) (*RunGroup, error)

+ func (b *InMemoryBackend) GetRunTask(runID, taskID string) (*RunTask, error)

+ func (b *InMemoryBackend) GetS3AccessPolicy(s3AccessPointARN string) (*S3AccessPolicy, error)

+ func (b *InMemoryBackend) GetSequenceStore(id string) (*SequenceStore, error)

+ func (b *InMemoryBackend) GetShare(shareID string) (*Share, error)

+ func (b *InMemoryBackend) GetVariantImportJob(jobID string) (*VariantImportJob, error)

+ func (b *InMemoryBackend) GetVariantStore(name string) (*VariantStore, error)

+ func (b *InMemoryBackend) GetWorkflow(id string) (*Workflow, error)

+ func (b *InMemoryBackend) GetWorkflowVersion(workflowID, versionName string) (*WorkflowVersion, error)

+ func (b *InMemoryBackend) ListAnnotationImportJobs(maxResults int, nextToken string) ([]*AnnotationImportJob, string, error)

+ func (b *InMemoryBackend) ListAnnotationStoreVersions(name string, maxResults int, nextToken string) ([]*AnnotationStoreVersion, string, error)

+ func (b *InMemoryBackend) ListAnnotationStores(maxResults int, nextToken string) ([]*AnnotationStore, string, error)

+ func (b *InMemoryBackend) ListConfigurations(maxResults int, nextToken string) ([]*Configuration, string, error)

+ func (b *InMemoryBackend) ListMultipartReadSetUploads(sequenceStoreID string, maxResults int, nextToken string) ([]*MultipartReadSetUpload, string, error)

+ func (b *InMemoryBackend) ListReadSetActivationJobs(sequenceStoreID string, maxResults int, nextToken string) ([]*ReadSetActivationJob, string, error)

+ func (b *InMemoryBackend) ListReadSetExportJobs(sequenceStoreID string, maxResults int, nextToken string) ([]*ReadSetExportJob, string, error)

+ func (b *InMemoryBackend) ListReadSetImportJobs(sequenceStoreID string, maxResults int, nextToken string) ([]*ReadSetImportJob, string, error)

+ func (b *InMemoryBackend) ListReadSetUploadParts(sequenceStoreID, uploadID string, maxResults int, nextToken string) ([]*ReadSetUploadPart, string, error)

+ func (b *InMemoryBackend) ListReadSets(sequenceStoreID string, filter *ReadSetFilter, maxResults int, ...) ([]*ReadSetMetadata, string, error)

+ func (b *InMemoryBackend) ListReferenceImportJobs(referenceStoreID string, maxResults int, nextToken string) ([]*ReferenceImportJob, string, error)

+ func (b *InMemoryBackend) ListReferenceStores(filter *ReferenceStoreFilter, maxResults int, nextToken string) ([]*ReferenceStore, string, error)

+ func (b *InMemoryBackend) ListReferences(referenceStoreID string, filter *ReferenceFilter, maxResults int, ...) ([]*ReferenceMetadata, string, error)

+ func (b *InMemoryBackend) ListRunBatches(maxResults int, nextToken string) ([]*RunBatch, string, error)

+ func (b *InMemoryBackend) ListRunCaches(maxResults int, nextToken string) ([]*RunCache, string, error)

+ func (b *InMemoryBackend) ListRunGroups(maxResults int, nextToken string) ([]*RunGroup, string, error)

+ func (b *InMemoryBackend) ListRunTasks(runID string, maxResults int, nextToken string) ([]*RunTask, string, error)

+ func (b *InMemoryBackend) ListRuns(maxResults int, nextToken string) ([]*Run, string, error)

+ func (b *InMemoryBackend) ListRunsInBatch(batchID string, maxResults int, nextToken string) ([]*Run, string, error)

+ func (b *InMemoryBackend) ListSequenceStores(filter *SequenceStoreFilter, maxResults int, nextToken string) ([]*SequenceStore, string, error)

+ func (b *InMemoryBackend) ListShares(resourceOwner string, maxResults int, nextToken string) ([]*Share, string, error)

+ func (b *InMemoryBackend) ListTagsForResource(resourceARN string) (map[string]string, error)

+ func (b *InMemoryBackend) ListVariantImportJobs(maxResults int, nextToken string) ([]*VariantImportJob, string, error)

+ func (b *InMemoryBackend) ListVariantStores(maxResults int, nextToken string) ([]*VariantStore, string, error)

+ func (b *InMemoryBackend) ListWorkflowVersions(workflowID string, maxResults int, nextToken string) ([]*WorkflowVersion, string, error)

+ func (b *InMemoryBackend) ListWorkflows(maxResults int, nextToken string) ([]*Workflow, string, error)

+ func (b *InMemoryBackend) PutS3AccessPolicy(s3AccessPointARN, policy string) error

+ func (b *InMemoryBackend) Region() string

+ func (b *InMemoryBackend) Reset()

+ func (b *InMemoryBackend) Restore(ctx context.Context, data []byte) error

+ func (b *InMemoryBackend) Snapshot(ctx context.Context) []byte

+ func (b *InMemoryBackend) StartAnnotationImportJob(destinationName, roleARN string, items []AnnotationImportItem) (*AnnotationImportJob, error)

+ func (b *InMemoryBackend) StartReadSetActivationJob(sequenceStoreID string, sources []ReadSetActivationJobSource) (*ReadSetActivationJob, error)

+ func (b *InMemoryBackend) StartReadSetExportJob(sequenceStoreID, destination string, sources []ReadSetExportJobSource) (*ReadSetExportJob, error)

+ func (b *InMemoryBackend) StartReadSetImportJob(sequenceStoreID, roleARN string, sources []ReadSetImportJobSource) (*ReadSetImportJob, error)

+ func (b *InMemoryBackend) StartReferenceImportJob(referenceStoreID, roleARN string, sources []ReferenceImportJobSource) (*ReferenceImportJob, error)

+ func (b *InMemoryBackend) StartRun(workflowID, roleARN, name, runBatchID string, params map[string]any, ...) (*Run, error)

+ func (b *InMemoryBackend) StartRunBatch(workflowID, roleARN, name string) (*RunBatch, error)

+ func (b *InMemoryBackend) StartVariantImportJob(destinationName, roleARN string, items []VariantImportItem) (*VariantImportJob, error)

+ func (b *InMemoryBackend) TagResource(resourceARN string, tags map[string]string) error

+ func (b *InMemoryBackend) UntagResource(resourceARN string, tagKeys []string) error

+ func (b *InMemoryBackend) UpdateAnnotationStore(name, description string) (*AnnotationStore, error)

+ func (b *InMemoryBackend) UpdateAnnotationStoreVersion(name, versionName, description string) (*AnnotationStoreVersion, error)

+ func (b *InMemoryBackend) UpdateRunCache(id, name, description string) error

+ func (b *InMemoryBackend) UpdateRunGroup(id, name string, maxCPUs, maxRuns, maxDuration int, maxGPUs int) (*RunGroup, error)

+ func (b *InMemoryBackend) UpdateSequenceStore(id, name, description string) (*SequenceStore, error)

+ func (b *InMemoryBackend) UpdateVariantStore(name, description string) (*VariantStore, error)

+ func (b *InMemoryBackend) UpdateWorkflow(id, name, description string) error

+ func (b *InMemoryBackend) UpdateWorkflowVersion(workflowID, versionName, description string) error

+ func (b *InMemoryBackend) UploadReadSetPart(sequenceStoreID, uploadID string, partNumber int, partSource string, ...) (string, error)

+ type MultipartReadSetUpload struct

+ CreationTime time.Time

+ Name string

+ SequenceStoreID string

+ SequenceType string

+ Status string

+ Tags map[string]string

+ UploadID string

+ type Provider struct

+ func (p *Provider) Init(ctx *service.AppContext) (service.Registerable, error)

+ func (p *Provider) Name() string

+ type ReadSetActivationJob struct

+ CompletionTime *time.Time

+ CreationTime time.Time

+ ID string

+ SequenceStoreID string

+ Sources []ReadSetActivationJobSource

+ Status string

+ type ReadSetActivationJobSource struct

+ ReadSetID string

+ type ReadSetBatchError struct

+ Code string

+ ID string

+ Message string

+ type ReadSetExportJob struct

+ CompletionTime *time.Time

+ CreationTime time.Time

+ Destination string

+ ID string

+ SequenceStoreID string

+ Sources []ReadSetExportJobSource

+ Status string

+ type ReadSetExportJobSource struct

+ ReadSetID string

+ type ReadSetFilter struct

+ Name string

+ Status string

+ type ReadSetImportJob struct

+ CompletionTime *time.Time

+ CreationTime time.Time

+ ID string

+ RoleARN string

+ SequenceStoreID string

+ Sources []ReadSetImportJobSource

+ Status string

+ type ReadSetImportJobSource struct

+ Description string

+ Name string

+ ReferenceARN string

+ SampleID string

+ SourceFileType string

+ SourceFiles struct{ ... }

+ SubjectID string

+ type ReadSetMetadata struct

+ Arn string

+ CreationTime time.Time

+ Description string

+ Files map[string]any

+ ID string

+ Name string

+ ReferenceARN string

+ SampleID string

+ SequenceStoreID string

+ SequenceType string

+ Status string

+ StatusMessage string

+ SubjectID string

+ Tags map[string]string

+ UpdateTime time.Time

+ type ReadSetUploadPart struct

+ Checksum string

+ LastUpdatedTime time.Time

+ PartNumber int

+ PartSize int64

+ Source string

+ type ReferenceFilter struct

+ Name string

+ type ReferenceImportJob struct

+ CompletionTime *time.Time

+ CreationTime time.Time

+ ID string

+ ReferenceStoreID string

+ RoleARN string

+ Sources []ReferenceImportJobSource

+ Status string

+ type ReferenceImportJobSource struct

+ Description string

+ Name string

+ SourceFile string

+ type ReferenceMetadata struct

+ Arn string

+ CreationTime time.Time

+ Description string

+ ID string

+ MD5 string

+ Name string

+ ReferenceStoreID string

+ Status string

+ Tags map[string]string

+ UpdateTime time.Time

+ type ReferenceStore struct

+ Arn string

+ CreationTime time.Time

+ Description string

+ ID string

+ Name string

+ S3Access map[string]any

+ SseConfig map[string]any

+ Tags map[string]string

+ type ReferenceStoreFilter struct

+ Name string

+ type Run struct

+ Arn string

+ CreationTime time.Time

+ ID string

+ Name string

+ Params map[string]any

+ RoleARN string

+ RunBatchID string

+ StartTime *time.Time

+ Status string

+ StopTime *time.Time

+ Tags map[string]string

+ WorkflowID string

+ type RunBatch struct

+ Arn string

+ CreationTime time.Time

+ ID string

+ Name string

+ RoleARN string

+ Status string

+ Tags map[string]string

+ WorkflowID string

+ type RunCache struct

+ Arn string

+ CacheS3Location string

+ CreationTime time.Time

+ Description string

+ ID string

+ Name string

+ Status string

+ Tags map[string]string

+ type RunGroup struct

+ Arn string

+ CreationTime time.Time

+ ID string

+ MaxCPUs int

+ MaxDuration int

+ MaxGPUs int

+ MaxRuns int

+ Name string

+ Tags map[string]string

+ type RunTask struct

+ CPUs int

+ CreationTime time.Time

+ Memory int

+ Name string

+ RunID string

+ StartTime *time.Time

+ Status string

+ StopTime *time.Time

+ TaskID string

+ type S3AccessPolicy struct

+ Policy string

+ S3AccessPointARN string

+ type SequenceStore struct

+ Arn string

+ CreationTime time.Time

+ Description string

+ ETagAlgorithm string

+ ID string

+ Name string

+ S3Access map[string]any

+ SseConfig map[string]any

+ Status string

+ Tags map[string]string

+ UpdateTime time.Time

+ type SequenceStoreFilter struct

+ Name string

+ type Share struct

+ CreationTime time.Time

+ Name string

+ PrincipalSubscriber string

+ ResourceARN string

+ ShareID string

+ Status string

+ UpdateTime *time.Time

+ type StorageBackend interface

+ AbortMultipartReadSetUpload func(sequenceStoreID, uploadID string) error

+ AcceptShare func(shareID string) (*Share, error)

+ AccountID func() string

+ BatchDeleteReadSet func(sequenceStoreID string, ids []string) ([]ReadSetBatchError, error)

+ CancelAnnotationImportJob func(jobID string) error

+ CancelRun func(id string) error

+ CancelRunBatch func(id string) error

+ CancelVariantImportJob func(jobID string) error

+ CompleteMultipartReadSetUpload func(sequenceStoreID, uploadID string) (*ReadSetMetadata, error)

+ CreateAnnotationStore func(name, storeFormat string, reference, sseConfig, storeOptions map[string]any, ...) (*AnnotationStore, error)

+ CreateAnnotationStoreVersion func(name, versionName, description string, tags map[string]string) (*AnnotationStoreVersion, error)

+ CreateConfiguration func(name, description string) (*Configuration, error)

+ CreateMultipartReadSetUpload func(sequenceStoreID, name, sequenceType string, tags map[string]string) (*MultipartReadSetUpload, error)

+ CreateReferenceStore func(name, description string, tags map[string]string) (*ReferenceStore, error)

+ CreateRunCache func(name, cacheS3Location string, tags map[string]string) (*RunCache, error)

+ CreateRunGroup func(name string, maxCPUs, maxRuns, maxDuration int, maxGPUs int, ...) (*RunGroup, error)

+ CreateSequenceStore func(name, description string, tags map[string]string) (*SequenceStore, error)

+ CreateShare func(resourceARN, principalSubscriber, name string) (*Share, error)

+ CreateVariantStore func(name string, reference map[string]any, tags map[string]string) (*VariantStore, error)

+ CreateWorkflow func(name, description, definitionZip, definitionURI, engine string, ...) (*Workflow, error)

+ CreateWorkflowVersion func(workflowID, versionName, description string, tags map[string]string) (*WorkflowVersion, error)

+ DeleteAnnotationStore func(name string) (*AnnotationStore, error)

+ DeleteAnnotationStoreVersions func(name string, versionNames []string) ([]VersionDeleteError, error)

+ DeleteConfiguration func(name string) error

+ DeleteReference func(referenceStoreID, id string) error

+ DeleteReferenceStore func(id string) error

+ DeleteRun func(id string) error

+ DeleteRunBatch func(id string) error

+ DeleteRunCache func(id string) error

+ DeleteRunGroup func(id string) error

+ DeleteRunsInBatch func(batchID string) error

+ DeleteS3AccessPolicy func(s3AccessPointARN string) error

+ DeleteSequenceStore func(id string) error

+ DeleteShare func(shareID string) (*Share, error)

+ DeleteVariantStore func(name string) (*VariantStore, error)

+ DeleteWorkflow func(id string) error

+ DeleteWorkflowVersion func(workflowID, versionName string) error

+ GetAnnotationImportJob func(jobID string) (*AnnotationImportJob, error)

+ GetAnnotationStore func(name string) (*AnnotationStore, error)

+ GetAnnotationStoreVersion func(name, versionName string) (*AnnotationStoreVersion, error)

+ GetConfiguration func(name string) (*Configuration, error)

+ GetReadSetActivationJob func(sequenceStoreID, jobID string) (*ReadSetActivationJob, error)

+ GetReadSetBytes func(sequenceStoreID, id string) ([]byte, error)

+ GetReadSetExportJob func(sequenceStoreID, jobID string) (*ReadSetExportJob, error)

+ GetReadSetImportJob func(sequenceStoreID, jobID string) (*ReadSetImportJob, error)

+ GetReadSetMetadata func(sequenceStoreID, id string) (*ReadSetMetadata, error)

+ GetReferenceBytes func(referenceStoreID, id string) ([]byte, error)

+ GetReferenceImportJob func(referenceStoreID, jobID string) (*ReferenceImportJob, error)

+ GetReferenceMetadata func(referenceStoreID, id string) (*ReferenceMetadata, error)

+ GetReferenceStore func(id string) (*ReferenceStore, error)

+ GetRun func(id string) (*Run, error)

+ GetRunBatch func(id string) (*RunBatch, error)

+ GetRunCache func(id string) (*RunCache, error)

+ GetRunGroup func(id string) (*RunGroup, error)

+ GetRunTask func(runID, taskID string) (*RunTask, error)

+ GetS3AccessPolicy func(s3AccessPointARN string) (*S3AccessPolicy, error)

+ GetSequenceStore func(id string) (*SequenceStore, error)

+ GetShare func(shareID string) (*Share, error)

+ GetVariantImportJob func(jobID string) (*VariantImportJob, error)

+ GetVariantStore func(name string) (*VariantStore, error)

+ GetWorkflow func(id string) (*Workflow, error)

+ GetWorkflowVersion func(workflowID, versionName string) (*WorkflowVersion, error)

+ ListAnnotationImportJobs func(maxResults int, nextToken string) ([]*AnnotationImportJob, string, error)

+ ListAnnotationStoreVersions func(name string, maxResults int, nextToken string) ([]*AnnotationStoreVersion, string, error)

+ ListAnnotationStores func(maxResults int, nextToken string) ([]*AnnotationStore, string, error)

+ ListConfigurations func(maxResults int, nextToken string) ([]*Configuration, string, error)

+ ListMultipartReadSetUploads func(sequenceStoreID string, maxResults int, nextToken string) ([]*MultipartReadSetUpload, string, error)

+ ListReadSetActivationJobs func(sequenceStoreID string, maxResults int, nextToken string) ([]*ReadSetActivationJob, string, error)

+ ListReadSetExportJobs func(sequenceStoreID string, maxResults int, nextToken string) ([]*ReadSetExportJob, string, error)

+ ListReadSetImportJobs func(sequenceStoreID string, maxResults int, nextToken string) ([]*ReadSetImportJob, string, error)

+ ListReadSetUploadParts func(sequenceStoreID, uploadID string, maxResults int, nextToken string) ([]*ReadSetUploadPart, string, error)

+ ListReadSets func(sequenceStoreID string, filter *ReadSetFilter, maxResults int, ...) ([]*ReadSetMetadata, string, error)

+ ListReferenceImportJobs func(referenceStoreID string, maxResults int, nextToken string) ([]*ReferenceImportJob, string, error)

+ ListReferenceStores func(filter *ReferenceStoreFilter, maxResults int, nextToken string) ([]*ReferenceStore, string, error)

+ ListReferences func(referenceStoreID string, filter *ReferenceFilter, maxResults int, ...) ([]*ReferenceMetadata, string, error)

+ ListRunBatches func(maxResults int, nextToken string) ([]*RunBatch, string, error)

+ ListRunCaches func(maxResults int, nextToken string) ([]*RunCache, string, error)

+ ListRunGroups func(maxResults int, nextToken string) ([]*RunGroup, string, error)

+ ListRunTasks func(runID string, maxResults int, nextToken string) ([]*RunTask, string, error)

+ ListRuns func(maxResults int, nextToken string) ([]*Run, string, error)

+ ListRunsInBatch func(batchID string, maxResults int, nextToken string) ([]*Run, string, error)

+ ListSequenceStores func(filter *SequenceStoreFilter, maxResults int, nextToken string) ([]*SequenceStore, string, error)

+ ListShares func(resourceOwner string, maxResults int, nextToken string) ([]*Share, string, error)

+ ListTagsForResource func(resourceARN string) (map[string]string, error)

+ ListVariantImportJobs func(maxResults int, nextToken string) ([]*VariantImportJob, string, error)

+ ListVariantStores func(maxResults int, nextToken string) ([]*VariantStore, string, error)

+ ListWorkflowVersions func(workflowID string, maxResults int, nextToken string) ([]*WorkflowVersion, string, error)

+ ListWorkflows func(maxResults int, nextToken string) ([]*Workflow, string, error)

+ PutS3AccessPolicy func(s3AccessPointARN, policy string) error

+ Region func() string

+ Reset func()

+ Restore func(ctx context.Context, data []byte) error

+ Snapshot func(ctx context.Context) []byte

+ StartAnnotationImportJob func(destinationName, roleARN string, items []AnnotationImportItem) (*AnnotationImportJob, error)

+ StartReadSetActivationJob func(sequenceStoreID string, sources []ReadSetActivationJobSource) (*ReadSetActivationJob, error)

+ StartReadSetExportJob func(sequenceStoreID, destination string, sources []ReadSetExportJobSource) (*ReadSetExportJob, error)

+ StartReadSetImportJob func(sequenceStoreID, roleARN string, sources []ReadSetImportJobSource) (*ReadSetImportJob, error)

+ StartReferenceImportJob func(referenceStoreID, roleARN string, sources []ReferenceImportJobSource) (*ReferenceImportJob, error)

+ StartRun func(workflowID, roleARN, name, runBatchID string, params map[string]any, ...) (*Run, error)

+ StartRunBatch func(workflowID, roleARN, name string) (*RunBatch, error)

+ StartVariantImportJob func(destinationName, roleARN string, items []VariantImportItem) (*VariantImportJob, error)

+ TagResource func(resourceARN string, tags map[string]string) error

+ UntagResource func(resourceARN string, tagKeys []string) error

+ UpdateAnnotationStore func(name, description string) (*AnnotationStore, error)

+ UpdateAnnotationStoreVersion func(name, versionName, description string) (*AnnotationStoreVersion, error)

+ UpdateRunCache func(id, name, description string) error

+ UpdateRunGroup func(id, name string, maxCPUs, maxRuns, maxDuration int, maxGPUs int) (*RunGroup, error)

+ UpdateSequenceStore func(id, name, description string) (*SequenceStore, error)

+ UpdateVariantStore func(name, description string) (*VariantStore, error)

+ UpdateWorkflow func(id, name, description string) error

+ UpdateWorkflowVersion func(workflowID, versionName, description string) error

+ UploadReadSetPart func(sequenceStoreID, uploadID string, partNumber int, partSource string, ...) (string, error)

+ type VariantImportItem struct

+ Source string

+ type VariantImportJob struct

+ CompletionTime *time.Time

+ CreationTime time.Time

+ DestinationName string

+ ID string

+ Items []VariantImportItem

+ RoleARN string

+ Status string

+ type VariantStore struct

+ Arn string

+ CreationTime time.Time

+ Description string

+ ID string

+ Name string

+ Reference map[string]any

+ Status string

+ Tags map[string]string

+ UpdateTime time.Time

+ type VersionDeleteError struct

+ Code string

+ Message string

+ VersionName string

+ type Workflow struct

+ Arn string

+ CreationTime time.Time

+ Description string

+ Engine string

+ ID string

+ Name string

+ Status string

+ Tags map[string]string

+ Type string

+ type WorkflowVersion struct

+ Arn string

+ CreationTime time.Time

+ Description string

+ Engine string

+ Status string

+ Tags map[string]string

+ Type string

+ VersionName string

+ WorkflowID string

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