amr

type Filters struct {
	// Samples restricts results to a specific set of sample accessions.
	// Nil or empty means no restriction.
	Samples map[string]struct{}
	// Class filters by drug class (case-insensitive substring match). Empty means all.
	Class string
	// GenePattern filters by gene symbol. Supports % wildcards (prefix/suffix/contains). Empty means all.
	GenePattern string
	// MinCoverage is the minimum coverage percentage (0 = no minimum).
	MinCoverage float64
	// MinIdentity is the minimum identity percentage (0 = no minimum).
	MinIdentity float64
	// ElementType restricts to a specific element type ("AMR", "STRESS", "VIRULENCE"). Empty means all.
	ElementType string
	// Genera restricts results to specific bacterial genera (case-insensitive).
	// Nil or empty means all genera (full scan).
	Genera []string
	// Species restricts results to specific full species names, e.g. "Escherichia coli"
	// (case-insensitive exact match against the row's Species field).
	// Nil or empty means no species-level restriction.
	Species []string
	// Limit caps the number of returned results. 0 means no limit.
	Limit int
}

type Result struct {
	SampleAccession string
	GeneSymbol      string
	ElementType     string
	ElementSubtype  string
	Coverage        float64
	Identity        float64
	Method          string
	Class           string
	Subclass        string
	Species         string
	Genus           string
}