utils

package
v0.1.1 Latest Latest
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 Go to latest Published: Oct 5, 2016 License: GPL-2.0 Imports: 7 Imported by: 0

Documentation

Index

Constants

This section is empty.

Variables

This section is empty.

Functions

func ReadCompTrees 

func ReadCompTrees(inputfile string, compTrees chan<- Trees) (int, error)

Read a bunch of trees from the input file. One line must define One tree. One tree per line

func ReadRefTree 

func ReadRefTree(inputfile string) (*tree.Tree, error)

Reads one tree from the input file

func ReadUntilSemiColon added in v0.1.1 

func ReadUntilSemiColon(r *bufio.Reader) (string, error)

ReadUntilSemiColon returns a string (without the ending \n) from the input buffered reader, ending at ';' or at end of file It allows to read a newick tree on several lines An error is returned iff there is an error with the buffered reader.

func Readln 

func Readln(r *bufio.Reader) (string, error)

Readln returns a single line (without the ending \n) from the input buffered reader. An error is returned iff there is an error with the buffered reader.

Types

type Trees 

type Trees struct {
	Tree *tree.Tree
	Id   int
}

Type for channel of trees

Source Files

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