Documentation
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Index ¶
Constants ¶
This section is empty.
Variables ¶
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var RootCmd = &cobra.Command{
Use: "gotree",
Short: "gotree: A set of tools to handle phylogenetic trees in go",
Long: `gotree is a set of tools to handle phylogenetic trees in go.
Different usages are implemented:
- Generating random trees
- Transforming trees (renaming tips, pruning/removing tips)
- Comparing trees (computing bootstrap supports, counting common edges)
`,
}
RootCmd represents the base command when called without any subcommands
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var Version string
Functions ¶
Types ¶
type EdgeStruct ¶ added in v0.1.4
type EdgeStruct struct {
// contains filtered or unexported fields
}
Source Files
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- balancedtree.go
- caterpillartree.go
- classical.go
- clear.go
- clearlength.go
- clearpvalue.go
- clearsupport.go
- collapse.go
- collapsebrlen.go
- collapsesupport.go
- compare.go
- compareedges.go
- compute.go
- consensus.go
- difftips.go
- divide.go
- edges.go
- edgetrees.go
- generate.go
- mastlike.go
- matrix.go
- midpoint.go
- minbrlen.go
- nodes.go
- outgroup.go
- parsimony.go
- prune.go
- randbrlen.go
- randsupport.go
- rename.go
- reroot.go
- roccurve.go
- root.go
- rooted.go
- shuffletips.go
- stats.go
- support.go
- tips.go
- uniformtree.go
- unroot.go
- version.go
- yuletree.go
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