README
¶
bam
Pure Go SAM and BAM handling
go get code.google.com/p/biogo.hts
Directories
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| Path | Synopsis |
|---|---|
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Package bam implements BAM file format reading, writing and indexing.
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Package bam implements BAM file format reading, writing and indexing. |
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Package bgzf implements BGZF format reading and writing according to the SAM specification.
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Package bgzf implements BGZF format reading and writing according to the SAM specification. |
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cache
Package cache provides basic block cache types for the bgzf package.
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Package cache provides basic block cache types for the bgzf package. |
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index
Package index provides common code for CSI and tabix BGZF indexing.
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Package index provides common code for CSI and tabix BGZF indexing. |
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Package csi implements CSIv1 and CSIv2 coordinate sorted indexing.
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Package csi implements CSIv1 and CSIv2 coordinate sorted indexing. |
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Package internal provides shared code for BAI and tabix index implementations.
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Package internal provides shared code for BAI and tabix index implementations. |
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Package sam implements SAM file format reading and writing.
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Package sam implements SAM file format reading and writing. |
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Package tabix implements tabix coordinate sorted indexing.
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Package tabix implements tabix coordinate sorted indexing. |
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