models

type AddStrainPhenotypeInput struct {
	Phenotype   string  `json:"phenotype"`
	Environment *string `json:"environment,omitempty"`
	Assay       *string `json:"assay,omitempty"`
	Publication string  `json:"publication"`
	Notes       *string `json:"notes,omitempty"`
}

type BasePublication interface {
	IsBasePublication()
}

type Citation struct {
	Authors  string `json:"authors"`
	Title    string `json:"title"`
	Journal  string `json:"journal"`
	PubmedID string `json:"pubmed_id"`
}

type CreateContentInput struct {
	Name      string `json:"name"`
	CreatedBy string `json:"created_by"`
	Content   string `json:"content"`
	Namespace string `json:"namespace"`
}

type CreateGeneGeneralInfoInput struct {
	NameDescription []*string `json:"name_description,omitempty"`
	GeneProduct     *string   `json:"gene_product,omitempty"`
	Synonyms        []*string `json:"synonyms,omitempty"`
	Description     *string   `json:"description,omitempty"`
	User            string    `json:"user"`
}

type CreateOrderInput struct {
	Courier          string         `json:"courier"`
	CourierAccount   string         `json:"courier_account"`
	Comments         *string        `json:"comments,omitempty"`
	Payment          string         `json:"payment"`
	PurchaseOrderNum *string        `json:"purchase_order_num,omitempty"`
	Status           StatusEnum     `json:"status"`
	Consumer         string         `json:"consumer"`
	Payer            string         `json:"payer"`
	Purchaser        string         `json:"purchaser"`
	Items            []string       `json:"items"`
	ConsumerInfo     *UserInfoInput `json:"consumer_info,omitempty"`
	PayerInfo        *UserInfoInput `json:"payer_info,omitempty"`
}

type CreatePermissionInput struct {
	Permission  string `json:"permission"`
	Description string `json:"description"`
	Resource    string `json:"resource"`
}

type CreatePlasmidInput struct {
	CreatedBy        string   `json:"created_by"`
	UpdatedBy        string   `json:"updated_by"`
	Summary          *string  `json:"summary,omitempty"`
	EditableSummary  *string  `json:"editable_summary,omitempty"`
	Depositor        *string  `json:"depositor,omitempty"`
	Genes            []string `json:"genes,omitempty"`
	Dbxrefs          []string `json:"dbxrefs,omitempty"`
	Publications     []string `json:"publications,omitempty"`
	Name             string   `json:"name"`
	ImageMap         *string  `json:"image_map,omitempty"`
	Sequence         *string  `json:"sequence,omitempty"`
	InStock          bool     `json:"in_stock"`
	Keywords         []string `json:"keywords,omitempty"`
	GenbankAccession *string  `json:"genbank_accession,omitempty"`
}

type CreateRoleInput struct {
	Role        string `json:"role"`
	Description string `json:"description"`
}

type CreateStrainInput struct {
	CreatedBy           string   `json:"created_by"`
	UpdatedBy           string   `json:"updated_by"`
	Summary             *string  `json:"summary,omitempty"`
	EditableSummary     *string  `json:"editable_summary,omitempty"`
	Depositor           *string  `json:"depositor,omitempty"`
	Genes               []string `json:"genes,omitempty"`
	Dbxrefs             []string `json:"dbxrefs,omitempty"`
	Publications        []string `json:"publications,omitempty"`
	SystematicName      string   `json:"systematic_name"`
	Label               string   `json:"label"`
	Species             string   `json:"species"`
	Plasmid             *string  `json:"plasmid,omitempty"`
	Parent              *string  `json:"parent,omitempty"`
	Names               []string `json:"names,omitempty"`
	InStock             bool     `json:"in_stock"`
	Phenotypes          []string `json:"phenotypes,omitempty"`
	GeneticModification *string  `json:"genetic_modification,omitempty"`
	MutagenesisMethod   *string  `json:"mutagenesis_method,omitempty"`
	Characteristics     []string `json:"characteristics,omitempty"`
	Genotypes           []string `json:"genotypes,omitempty"`
}

type CreateUserInput struct {
	FirstName     string  `json:"first_name"`
	LastName      string  `json:"last_name"`
	Email         string  `json:"email"`
	Organization  *string `json:"organization,omitempty"`
	GroupName     *string `json:"group_name,omitempty"`
	FirstAddress  *string `json:"first_address,omitempty"`
	SecondAddress *string `json:"second_address,omitempty"`
	City          *string `json:"city,omitempty"`
	State         *string `json:"state,omitempty"`
	Zipcode       *string `json:"zipcode,omitempty"`
	Country       *string `json:"country,omitempty"`
	Phone         *string `json:"phone,omitempty"`
	IsActive      bool    `json:"is_active"`
}

type DeleteContent struct {
	Success bool `json:"success"`
}

type DeletePermission struct {
	Success bool `json:"success"`
}

type DeleteRole struct {
	Success bool `json:"success"`
}

type DeleteStock struct {
	Success bool `json:"success"`
}

type DeleteStrainPhenotype struct {
	Success bool `json:"success"`
}

type DeleteStrainPhenotypeInput struct {
	Phenotype   string  `json:"phenotype"`
	Environment *string `json:"environment,omitempty"`
	Assay       *string `json:"assay,omitempty"`
	Publication string  `json:"publication"`
	Notes       *string `json:"notes,omitempty"`
}

type DeleteUser struct {
	Success bool `json:"success"`
}

type Download struct {
	Title string          `json:"title"`
	Items []*DownloadItem `json:"items"`
}

type DownloadItem struct {
	Title string `json:"title"`
	URL   string `json:"url"`
}

type Extension struct {
	ID       string `json:"id"`
	Db       string `json:"db"`
	Relation string `json:"relation"`
	Name     string `json:"name"`
}

type FileToUpload struct {
	ID   int            `json:"id"`
	File graphql.Upload `json:"file"`
}

type GOAnnotation struct {
	ID           string       `json:"id"`
	Type         string       `json:"type"`
	Date         string       `json:"date"`
	EvidenceCode string       `json:"evidence_code"`
	GoTerm       string       `json:"go_term"`
	Qualifier    string       `json:"qualifier"`
	Publication  string       `json:"publication"`
	With         []*With      `json:"with,omitempty"`
	Extensions   []*Extension `json:"extensions,omitempty"`
	AssignedBy   string       `json:"assigned_by"`
}

type Gene struct {
	ID   string `json:"id"`
	Name string `json:"name"`
}

type GeneGeneralInfo struct {
	ID              string     `json:"id"`
	NameDescription []*string  `json:"name_description"`
	GeneProduct     *string    `json:"gene_product,omitempty"`
	Synonyms        []*string  `json:"synonyms"`
	Description     *string    `json:"description,omitempty"`
	CreatedAt       *time.Time `json:"created_at,omitempty"`
	CreatedBy       *user.User `json:"created_by,omitempty"`
	UpdatedAt       *time.Time `json:"updated_at,omitempty"`
	UpdatedBy       *user.User `json:"updated_by,omitempty"`
}

type Identity struct {
	ID         string    `json:"id"`
	Identifier string    `json:"identifier"`
	Provider   string    `json:"provider"`
	UserID     string    `json:"user_id"`
	CreatedAt  time.Time `json:"created_at"`
	UpdatedAt  time.Time `json:"updated_at"`
}

type ImageFile struct {
	URL string `json:"url"`
}

type LazyStock struct {
	CreatedBy           string
	UpdatedBy           string
	Depositor           string
	Genes, Publications []string
}

type LoginInput struct {
	ClientID    string `json:"client_id"`
	State       string `json:"state"`
	Code        string `json:"code"`
	Scopes      string `json:"scopes"`
	Provider    string `json:"provider"`
	RedirectURL string `json:"redirect_url"`
}

type Logout struct {
	Success bool `json:"success"`
}

type Mutation struct {
}

type NumberOfPublicationsWithGene struct {
	NumPubs      int                    `json:"num_pubs"`
	Publications []*PublicationWithGene `json:"publications"`
}

type OrderListWithCursor struct {
	Orders         []*order.Order `json:"orders"`
	NextCursor     int            `json:"nextCursor"`
	PreviousCursor int            `json:"previousCursor"`
	Limit          *int           `json:"limit,omitempty"`
	TotalCount     int            `json:"totalCount"`
}

type Organism struct {
	TaxonID        string      `json:"taxon_id"`
	ScientificName string      `json:"scientific_name"`
	Citations      []*Citation `json:"citations"`
	Downloads      []*Download `json:"downloads"`
}

type Phenotype struct {
	Phenotype   string       `json:"phenotype"`
	Note        *string      `json:"note,omitempty"`
	Assay       *string      `json:"assay,omitempty"`
	Environment *string      `json:"environment,omitempty"`
	Publication *Publication `json:"publication,omitempty"`
}

type Plasmid struct {
	StockCommon
	LazyStock
	ID               string    `json:"id"`
	Summary          *string   `json:"summary"`
	EditableSummary  *string   `json:"editable_summary"`
	ImageMap         *string   `json:"image_map"`
	Sequence         *string   `json:"sequence"`
	Name             string    `json:"name"`
	GenbankAccession *string   `json:"genbank_accession"`
	InStock          bool      `json:"in_stock"`
	CreatedAt        time.Time `json:"created_at"`
	UpdatedAt        time.Time `json:"updated_at"`
	Dbxrefs          []*string `json:"dbxrefs"`
}

type PlasmidListFilter struct {
	Name        *string     `json:"name,omitempty"`
	Summary     *string     `json:"summary,omitempty"`
	ID          *string     `json:"id,omitempty"`
	InStock     *bool       `json:"in_stock,omitempty"`
	PlasmidType PlasmidType `json:"plasmid_type"`
}

type PlasmidListWithCursor struct {
	Plasmids       []*Plasmid `json:"plasmids"`
	NextCursor     int        `json:"nextCursor"`
	PreviousCursor int        `json:"previousCursor"`
	Limit          *int       `json:"limit,omitempty"`
	TotalCount     int        `json:"totalCount"`
}

type PlasmidType string

type Publication struct {
	ID       string                `json:"id"`
	Doi      *string               `json:"doi,omitempty"`
	Title    string                `json:"title"`
	Abstract string                `json:"abstract"`
	Journal  string                `json:"journal"`
	PubDate  *time.Time            `json:"pub_date,omitempty"`
	Volume   *string               `json:"volume,omitempty"`
	Pages    *string               `json:"pages,omitempty"`
	Issn     *string               `json:"issn,omitempty"`
	PubType  string                `json:"pub_type"`
	Source   string                `json:"source"`
	Issue    *string               `json:"issue,omitempty"`
	Status   *string               `json:"status,omitempty"`
	Authors  []*publication.Author `json:"authors"`
}

type PublicationWithGene struct {
	RelatedGenes []*Gene               `json:"related_genes"`
	ID           string                `json:"id"`
	Doi          *string               `json:"doi,omitempty"`
	Title        string                `json:"title"`
	Abstract     string                `json:"abstract"`
	Journal      string                `json:"journal"`
	PubDate      *time.Time            `json:"pub_date,omitempty"`
	Volume       *string               `json:"volume,omitempty"`
	Pages        *string               `json:"pages,omitempty"`
	Issn         *string               `json:"issn,omitempty"`
	PubType      string                `json:"pub_type"`
	Source       string                `json:"source"`
	Issue        *string               `json:"issue,omitempty"`
	Status       *string               `json:"status,omitempty"`
	Authors      []*publication.Author `json:"authors"`
}

type Query struct {
}

type StatusEnum string

type Stock interface {
	IsStock()
}

type StockCommon struct{}

type StockEntityType string

type StockSearchFieldEnum string

type StockSearchResult struct {
	ID          string               `json:"id"`
	Entity      StockEntityType      `json:"entity"`
	Field       StockSearchFieldEnum `json:"field"`
	DisplayText string               `json:"display_text"`
	Score       float64              `json:"score"`
	Summary     string               `json:"summary"`
	StrainLabel string               `json:"strain_label"`
	InStock     bool                 `json:"in_stock"`
	StockType   string               `json:"stock_type"`
}

type StockSearchResultList struct {
	Results    []*StockSearchResult `json:"results"`
	Limit      *int                 `json:"limit,omitempty"`
	TotalCount int                  `json:"totalCount"`
}

type StockSuggestion struct {
	ID          string               `json:"id"`
	Entity      StockEntityType      `json:"entity"`
	Field       StockSearchFieldEnum `json:"field"`
	DisplayText string               `json:"display_text"`
	Score       float64              `json:"score"`
}

type StockSuggestionList struct {
	Suggestions []*StockSuggestion `json:"suggestions"`
	Limit       *int               `json:"limit,omitempty"`
	TotalCount  int                `json:"totalCount"`
}

type Strain struct {
	LazyStock
	StockCommon
	ID                  string    `json:"id"`
	CreatedAt           time.Time `json:"created_at"`
	UpdatedAt           time.Time `json:"updated_at"`
	Summary             *string   `json:"summary"`
	EditableSummary     *string   `json:"editable_summary"`
	Dbxrefs             []string  `json:"dbxrefs"`
	SystematicName      string    `json:"systematic_name"`
	Label               string    `json:"label"`
	Species             string    `json:"species"`
	Plasmid             *string   `json:"plasmid"`
	Parent              *string   `json:"parent"`
	Names               []string  `json:"names"`
	InStock             bool      `json:"in_stock"`
	GeneticModification *string   `json:"genetic_modification"`
	MutagenesisMethod   *string   `json:"mutagenesis_method"`
	Characteristics     []string  `json:"characteristics"`
	Genotypes           []string  `json:"genotypes"`
}

type StrainListFilter struct {
	Label      *string    `json:"label,omitempty"`
	Summary    *string    `json:"summary,omitempty"`
	ID         *string    `json:"id,omitempty"`
	InStock    *bool      `json:"in_stock,omitempty"`
	StrainType StrainType `json:"strain_type"`
}

type StrainListWithCursor struct {
	Strains        []*Strain `json:"strains"`
	NextCursor     int       `json:"nextCursor"`
	PreviousCursor int       `json:"previousCursor"`
	Limit          *int      `json:"limit,omitempty"`
	TotalCount     int       `json:"totalCount"`
}

type StrainType string

type UpdateContentInput struct {
	ID        string `json:"id"`
	UpdatedBy string `json:"updated_by"`
	Content   string `json:"content"`
}

type UpdateGeneGeneralInfoInput struct {
	NameDescription []*string `json:"name_description,omitempty"`
	GeneProduct     *string   `json:"gene_product,omitempty"`
	Synonyms        []*string `json:"synonyms,omitempty"`
	Description     *string   `json:"description,omitempty"`
	User            string    `json:"user"`
}

type UpdateOrderInput struct {
	Courier          *string     `json:"courier,omitempty"`
	CourierAccount   *string     `json:"courier_account,omitempty"`
	Comments         *string     `json:"comments,omitempty"`
	Payment          *string     `json:"payment,omitempty"`
	PurchaseOrderNum *string     `json:"purchase_order_num,omitempty"`
	Status           *StatusEnum `json:"status,omitempty"`
	Items            []string    `json:"items,omitempty"`
}

type UpdatePermissionInput struct {
	Permission  string `json:"permission"`
	Description string `json:"description"`
	Resource    string `json:"resource"`
}

type UpdatePlasmidInput struct {
	UpdatedBy        string   `json:"updated_by"`
	Summary          *string  `json:"summary,omitempty"`
	EditableSummary  *string  `json:"editable_summary,omitempty"`
	Depositor        *string  `json:"depositor,omitempty"`
	Genes            []string `json:"genes,omitempty"`
	Dbxrefs          []string `json:"dbxrefs,omitempty"`
	Publications     []string `json:"publications,omitempty"`
	Name             *string  `json:"name,omitempty"`
	ImageMap         *string  `json:"image_map,omitempty"`
	Sequence         *string  `json:"sequence,omitempty"`
	InStock          *bool    `json:"in_stock,omitempty"`
	Keywords         []string `json:"keywords,omitempty"`
	GenbankAccession *string  `json:"genbank_accession,omitempty"`
}

type UpdateRoleInput struct {
	Role        string `json:"role"`
	Description string `json:"description"`
}

type UpdateStrainInput struct {
	UpdatedBy           string   `json:"updated_by"`
	Summary             *string  `json:"summary,omitempty"`
	EditableSummary     *string  `json:"editable_summary,omitempty"`
	Depositor           *string  `json:"depositor,omitempty"`
	Genes               []string `json:"genes,omitempty"`
	Dbxrefs             []string `json:"dbxrefs,omitempty"`
	Publications        []string `json:"publications,omitempty"`
	SystematicName      *string  `json:"systematic_name,omitempty"`
	Label               *string  `json:"label,omitempty"`
	Species             *string  `json:"species,omitempty"`
	Plasmid             *string  `json:"plasmid,omitempty"`
	Parent              *string  `json:"parent,omitempty"`
	Names               []string `json:"names,omitempty"`
	InStock             *bool    `json:"in_stock,omitempty"`
	Phenotypes          []string `json:"phenotypes,omitempty"`
	GeneticModification *string  `json:"genetic_modification,omitempty"`
	MutagenesisMethod   *string  `json:"mutagenesis_method,omitempty"`
	Characteristics     []string `json:"characteristics,omitempty"`
	Genotypes           []string `json:"genotypes,omitempty"`
}

type UpdateStrainPhenotypePayloadInput struct {
	Phenotype   *string `json:"phenotype,omitempty"`
	Environment *string `json:"environment,omitempty"`
	Assay       *string `json:"assay,omitempty"`
	Publication *string `json:"publication,omitempty"`
	Notes       *string `json:"notes,omitempty"`
}

type UpdateStrainPhenotypeTargetInput struct {
	Phenotype   string  `json:"phenotype"`
	Environment *string `json:"environment,omitempty"`
	Assay       *string `json:"assay,omitempty"`
	Publication string  `json:"publication"`
	Notes       *string `json:"notes,omitempty"`
}

type UpdateUserInput struct {
	FirstName     *string `json:"first_name,omitempty"`
	LastName      *string `json:"last_name,omitempty"`
	Organization  *string `json:"organization,omitempty"`
	GroupName     *string `json:"group_name,omitempty"`
	FirstAddress  *string `json:"first_address,omitempty"`
	SecondAddress *string `json:"second_address,omitempty"`
	City          *string `json:"city,omitempty"`
	State         *string `json:"state,omitempty"`
	Zipcode       *string `json:"zipcode,omitempty"`
	Country       *string `json:"country,omitempty"`
	Phone         *string `json:"phone,omitempty"`
	IsActive      *bool   `json:"is_active,omitempty"`
}

type UserInfoInput struct {
	FirstName     *string `json:"first_name,omitempty"`
	LastName      *string `json:"last_name,omitempty"`
	Organization  *string `json:"organization,omitempty"`
	FirstAddress  *string `json:"first_address,omitempty"`
	SecondAddress *string `json:"second_address,omitempty"`
	City          *string `json:"city,omitempty"`
	State         *string `json:"state,omitempty"`
	Zipcode       *string `json:"zipcode,omitempty"`
	Country       *string `json:"country,omitempty"`
	Phone         *string `json:"phone,omitempty"`
}

type UserList struct {
	Users      []*user.User `json:"users"`
	PageNum    *string      `json:"pageNum,omitempty"`
	PageSize   *string      `json:"pageSize,omitempty"`
	TotalCount int          `json:"totalCount"`
}

type With struct {
	ID   string `json:"id"`
	Db   string `json:"db"`
	Name string `json:"name"`
}