config

type Config struct {
	// CacheDir is a path to working directory. Files in this directory
	// are cleaned up before each use of the app.
	CacheDir string

	// ImporterSrcDir is a path to a directory where source files are moved
	// or extracted to.
	ImporterSrcDir string

	// ImporterSfgaDir is a path where SFGA database is created. When
	// the database is ready it is exported to output file.
	ImporterSfgaDir string

	// DiffSrcDir is a path of a directory where the source SFGA file resides.
	// This file is to be compared with the target SFGA file.
	DiffSrcDir string

	// DiffTrgDir is a path to a directory where the target SFGA file resides.
	// This source SFGA file will be compared with the target file.
	DiffTrgDir string

	// DiffWorkDir contains data necessary for comparing data of source and
	// target SFGA files. It can be a suffix trie data, bloom filter backup etc.
	DiffWorkDir string

	// DiffSourceTaxon defines a taxon in the source file that limits comparison
	// to the children of the taxon.
	DiffSourceTaxon string

	// DiffTargetTaxon defines a taxon in the target file that limits comparison
	// to the children of the taxon.
	DiffTargetTaxon string

	// BadRow sets how to process rows with wrong number of fields in CSV
	// files. By default it is set to process such rows. Other options are
	// to return an error, or skip them.
	BadRow gnfmt.BadRow

	// BatchSize determines the size of slices to import into SFGA.
	BatchSize int

	// WithoutQuotes can be used to parse faster tab- or pipe-delimited
	// files where fields never escaped by quotes.
	WithoutQuotes bool

	// WithZipOutput indicates that zipped archives have to be created.
	WithZipOutput bool
}

type Option func(*Config)